Irene Saxby
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Articles
Recent activity by Irene Saxby-
Positional Liabilities based on Antibody Numbering
This article outlines the default positional liabilities for numbered antibody sequences, as well as how to specify your own custom positional liabilities. The positional liabilities work for all s...
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Using Graphs to interpret Clusters and Clonotypes
Geneious Biologics automatically generates a number of graphs to help you to interpret your sequences and find broader trends or discrepancies in your dataset. This article focuses on the graphs th...
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NGS Tutorial 5. Single Cell Analysis from Separate Lists
In this tutorial, you will learn how to use Single Cell Analysis to annotate NGS sequences that have already been partially processed and demultiplexed. You may have been provided sequences in list...
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Peptide Tutorial 1. Phage Display Libraries
In this tutorial, you will learn how to annotate and cluster short peptide sequences and compare panning rounds over an experiment. See our article on the Peptide Annotator to learn more about what...
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Antibody Annotator: Cluster Table Columns
This article lists the columns for a generic Cluster Table in an Antibody Annotator result and what each column represents. If you are unsure what a cluster is, please see our article on Understand...
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Adding Clusters to your Results
This article outlines how to add cluster(s) to a Biologics Annotator Result. When adding clusters, the Graphs tab will be updated to show the relevant added cluster graphs, and any new clusters wil...
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Citing Geneious Biologics
To cite Geneious Biologics in your paper, please use the following in the Methods section: (Geneious Biologics 20XX*. (https://www.geneious.com/biopharma)) *Where 20XX is the year.
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Numbering Schemes
This article describes what numbering schemes are and how to annotate your sequences using the different numbering schemes supported in Geneious Biologics. To find out more about using your own of...
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Subsetting sequences and re-calculating Clusters
This article outlines how to take a subset of your sequences from a Biologics Annotator Result document and re-run some of the analysis options. For example, you might wish to extract all sequences...
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Identifying variation within regions
This article outlines how to explore and plot amino acid variation by position within regions, such as the FRs, CDRs and even the entire V(D)J region. There are multiple ways to access these plots ...