Irene Saxby
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Articles
Recent activity by Irene Saxby-
Moving to Geneious Biologics from IMGT/V-Quest
This article compares and contrasts how to analyze the same antibody sequence using Geneious Biologics and IMGT/V-Quest. This might be helpful for users that are unsure of how to find their way aro...
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Using Feature Databases to identify Fusion Proteins
The Antibody Annotator has the capacity to add additional annotations that are not part of the variable domain of IgG-like proteins. This article explains how to create a Feature Database for annot...
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Archived Results
You may find that when accessing an older result, the graphs and tables will appear "empty" and you will be prompted to restore the result. This article outlines 1. When results become archived in ...
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Network and Tree plots: Identifying clonotype and sequence relationships
Analyzing clonal relationships can be challenging in NGS datasets with hundreds of millions of sequences. Developing new tools to enable researchers to identify and extract these meaningful trends ...
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NGS Antibody Analysis: Cluster Table Columns
This article lists the columns for a generic Cluster Table in an Single Cell Antibody Annotator result and what each column represents. If you are unsure what a cluster is, please see our article o...
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Linker Databases
Jump to: What are linker databases used for? How to create a linker database How to select a linker database when running an analysis FR/Linker boundary calling What are linker databases used for...
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Saving your analysis settings as profiles
Various operations, including all the Geneious Biologics annotation pipelines (Antibody Annotator, NGS Antibody Annotator and Single Cell Antibody Annotator) allow you to save your settings as Prof...
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NGS Tutorial 2. Monitoring Clonal Expansion
In this tutorial, you will learn how to annotate and compare single-chain variable fragment (scFv) libraries generated from multiple rounds of biopanning followed by next-generation sequencing with...
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Moving to Geneious Biologics from IgBLAST
This article compares and contrasts how to analyze the same antibody sequence using Geneious Biologics and IgBLAST. This might be helpful for users that are unsure of how to find their way around a...
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Understanding Single Cell technologies: Barcodes and UMIs
Molecular Barcodes are short nucleotide tags added to sequences of interest during sample preparation to provide information about which cell the sequence came from and/or other features of the sam...