Irene Saxby
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Articles
Recent activity by Irene Saxby-
Flow charts for Sanger Antibody Analysis
This article outlines how to process Sanger sequences in Geneious Biologics. The flow chart below displays the general workflow for working with raw or processed sequences:If you have Single Cell d...
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Flowcharts for processing different NGS sequencing formats
This article outlines how to process NGS sequencing data such as Illumina (HiSeq, MiSeq etc.) and PacBio sequencing in Geneious Biologics.The flow chart below displays the general workflow for work...
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May 2023 - New Document View, Positional Liabilities, Bulk Labelling and more
Over the past few months we have been working on some exciting new features for Geneious Biologics. This includes: An improved user interface experience allowing you to: Preview documents to see ...
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December 2022 - New Numbering Schemes, Streamlined Exporting and more
Over the past few months we have been working on some exciting new features for Geneious Biologics. This includes: More Numbering Schemes for annotation, including: Chothia Martin AHo Kabat (numb...
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Using Graphs for Quality Assurance and Data Exploration
Geneious Biologics automatically generates a number of graphs to help you to interpret your sequences and find broader trends or discrepancies in your dataset. This article focuses on the graphs th...
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May 2022 - Customisable Percentage-based Clustering, History Viewer and more
Over the past few months we have been working on some exciting new features for Geneious Biologics. This includes: More user-friendly and customisable clustering options for Antibody Annotator Stre...
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Sanger Tutorial 1. Assembling and Chain-Pairing Sanger Sequences
In this tutorial you will learn how to use a Name Scheme to both pair chains and assemble forward and reverse reads concurrently. Note: this was previously Sanger Tutorial 3.This tutorial will cove...
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How to make a Custom Antibody Reference Database
As a user of Biologics, you can make your own custom Reference Databases for annotating your sequences. For more detail on what a custom reference database is, please see this article: Understandin...
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NGS Antibody Annotator
If you have datasets larger than 5 million sequences, we recommend using NGS Antibody Annotator. The NGS Antibody Annotator pipeline uses an alternative algorithm to Antibody Annotator that collaps...
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Analyzing TCR sequences in Geneious Biologics
Although initially designed to annotate IgG and BCR sequences, Geneious Biologics can aIso annotate TCR variable regions. All that is needed for this is a correctly formatted Reference Database con...