Irene Saxby
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Articles
Recent activity by Irene Saxby-
May 2023 - New Document View, Positional Liabilities, Bulk Labelling and more
Over the past few months we have been working on some exciting new features for Geneious Biologics. This includes: An improved user interface experience allowing you to: Preview documents to see ...
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December 2022 - New Numbering Schemes, Streamlined Exporting and more
Over the past few months we have been working on some exciting new features for Geneious Biologics. This includes: More Numbering Schemes for annotation, including: Chothia Martin AHo Kabat (numb...
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Using Graphs for Quality Assurance and Data Exploration
Geneious Biologics automatically generates a number of graphs to help you to interpret your sequences and find broader trends or discrepancies in your dataset. This article focuses on the graphs th...
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May 2022 - Customisable Percentage-based Clustering, History Viewer and more
Over the past few months we have been working on some exciting new features for Geneious Biologics. This includes: More user-friendly and customisable clustering options for Antibody Annotator Str...
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Sanger Tutorial 1. Assembling and Chain-Pairing Sanger Sequences
In this tutorial you will learn how to use a Name Scheme to both pair chains and assemble forward and reverse reads concurrently. Note: this was previously Sanger Tutorial 3. This tutorial will cov...
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How to make a Custom Antibody Reference Database
As a user of Biologics, you can make your own custom Reference Databases for annotating your sequences. For more detail on what a custom reference database is, please see this article: Understandin...
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NGS Antibody Annotator
If you have datasets larger than 5 million sequences, we recommend using NGS Antibody Annotator. The NGS Antibody Annotator pipeline uses an alternative algorithm to Antibody Annotator that collaps...
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Analyzing TCR sequences in Geneious Biologics
Although initially designed to annotate IgG and BCR sequences, Geneious Biologics can aIso annotate TCR variable regions. All that is needed for this is a correctly formatted Reference Database con...
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Workflows and Flowcharts for Antibody Analysis
This article outlines the general workflow through the Biologics platform to analyze your variable region antibody and antibody-like sequences. It serves as a general guide and does not include all...
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Quick Analysis
This article outlines how to use Quick Analysis, a simple tool to annotate and visualize your sequences with as little analysis customization as possible. Quick Analysis is available as part of the...