Megan Kennington
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June 2020 - Dynamic Reporting, Automated Sequence Repair, and more
Here at Geneious Biologics we are still working from home, but we may soon return to the office depending on what the New Zealand government recommends. We have been busy and have recently released...
How do I view and extract annotated sequences?
Viewing annotated sequences To view individual annotated sequences, select a Biologics Annotator Result document in the Files table. A loading screen with a spinner will appear and upon completion ...
What are Reference Databases?
A reference sequence database is chosen as the basis by which query sequences are annotated, and therefore, must include annotated reference sequences. These reference sequences will be used by the...
How do I use custom sequences as my reference sequence database?
As a user of Biologics, you can select custom reference sequence databases for use in analyses. The analysis operations that allow or expect a reference database will contain a dropdown listing the...
Sharing Folders
Geneious Biologics allows you to manage the permissions of your folders and documents, facilitating sharing folders with other users in your organisation. Only top level folders can have their perm...
How do I merge overlapping fragments of a DNA sequence into a longer contig?
Assembly is normally used to align and merge overlapping fragments of a DNA sequenceto reconstruct the original sequence. The assembly essentially appears as a multiple sequencealignment of reads (...
How do I align sequences?
Aligning sequences is a good way of visually comparing sequences, and can include a tree, assay data, and cluster information. Pairwise and multiple sequence alignment can be performed both before ...
Users and Groups
Geneious Biologics works best if each user in your organisation has a separate login. This allows each user to keep private folders, and view the jobs they have run. It also allows users to have th...
NGS Tutorial 4. Single Clone Antibody Analysis
In this tutorial, we will look at the Single Clone Antibody Analysis pipeline. It allows Users that have been NGS sequencing antibody chains from Single Clones in wells or Single Cells in droplets ...
NGS Tutorial 3. Using Barcodes and UMIs
In this tutorial, you will learn how to group sequences according to Barcodes and collapse sequences together if they have the same UMI (Unique Molecular Identifier) and the same sequence. The to...