You can either Extract selected sequences to a new sequence list, or Export the selected sequences to a downloadable .geneious file. You can also export the Sequences Table as an excel/csv file. To narrow down the sequences to extract/export, you may find the Filter Bar useful.
To export or extract sequences from any Biologics Annotator result, select the sequences in the Sequences Table you would like to export/extract.
In the above image 36 sequences have been selected for extraction that have the Heavy CDR3 sequence ARWEYYAMDY. This was achieved using the Cluster Table drop down menu, to learn more see this article: Understanding "clusters". I could also use the filtering function to further narrow down my results.
Click Extract once you have selected your sequences. This operation will output extracted sequences into a sequence list in the same folder, but you can enter an output folder name to automatically create a child folder where the sequence list will be saved.
Exporting Sequences and Sequence Tables
The export function allows you to download either the Sequences Table or the sequences selected to your hard drive. There is more detail about Export here.
Saving an image of selected sequences
You can export a .png image of your sequences, and save it in Geneious Biologics for future reference. The image will contain all of the sequences, not just what is in the viewer. It is recommended that you don't export more than 100 sequences at once.
- Select your desired sequences in the All Sequences table.
- Format your sequences as you want to see them in the image. This could be adjusting to the desired zoom level, choosing annotations to show, and adding any data columns in the "Sidebar" that you would like to display.
- Click the "Export as Image" button directly above the sequence viewer.
- Name your image file, and choose whether you would like to automatically download your image. Your image will also be saved in the same Geneious Biologics folder as your original sequences.